{
  "_id": "6a63b1f0a0832cf944e3d822",
  "Type": "Package",
  "Package": "expowo",
  "Title": "An R Package for Mining Global Plant Diversity and Distribution\nData",
  "Version": "3.1",
  "Authors@R": "c(person(given = \"Debora\",\nfamily = \"Zuanny\",\nrole = c(\"aut\", \"cre\", \"cph\"),\nemail = \"deborazuanny@gmail.com\",\ncomment = c(ORCID = \"0000-0001-6623-3788\")),\nperson(given = \"Domingos\",\nfamily = \"Cardoso\",\nrole = c(\"aut\", \"ths\", \"cph\"),\nemail = \"cardosobot@gmail.com\",\ncomment = c(ORCID = \"0000-0001-7072-2656\")))",
  "Maintainer": "Debora Zuanny <deborazuanny@gmail.com>",
  "Description": "Produces diversity estimates and species lists with\nassociated global distribution for any vascular plant family\nand genus from Plants of the World Online database, by\ninteracting with the source code of each plant taxon page. It\nalso creates global maps of species richness, graphics of\nspecies discoveries and name changes over time. For more\ndetails: 'Zuanny, D.C., B.Vilela, P.W.Moonlight, T.E.Särkinen,\nand D.Cardoso. 2024. expowo: An R package for mining global\nplant diversity and distribution data. Applications in Plant\nSciences 12: e11609'.",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.2.3",
  "URL": "https://dboslab.github.io/expowo/,\nhttps://github.com/dboslab/expowo",
  "BugReports": "https://github.com/DBOSlab/expowo/issues",
  "VignetteBuilder": "knitr",
  "Config/testthat/edition": "3",
  "Config/pak/sysreqs": "libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev\nmake libicu-dev libssl-dev libproj-dev libsqlite3-dev\nlibudunits2-dev",
  "Repository": "https://dboslab.r-universe.dev",
  "Date/Publication": "2026-07-24 17:09:45 UTC",
  "RemoteUrl": "https://github.com/dboslab/expowo",
  "RemoteRef": "HEAD",
  "RemoteSha": "e2b8e10cf2f7d3ea17af0a90d52609f9a0745986",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-07-24 18:36:06 UTC",
    "User": "root"
  },
  "Author": "Debora Zuanny [aut, cre, cph] (ORCID:\n<https://orcid.org/0000-0001-6623-3788>),\nDomingos Cardoso [aut, ths, cph] (ORCID:\n<https://orcid.org/0000-0001-7072-2656>)",
  "_user": "dboslab",
  "_type": "src",
  "_file": "expowo_3.1.tar.gz",
  "_fileid": "https://r2.ropensci.org/e650591ef832c11be4b4e14dbcb274054d22cb31fe10afe3bf0672e37ed32cfa",
  "_filesize": 6170962,
  "_sha256": "e650591ef832c11be4b4e14dbcb274054d22cb31fe10afe3bf0672e37ed32cfa",
  "_expires": "2026-11-01T18:41:50.000Z",
  "_created": "2026-07-24T18:36:06.000Z",
  "_published": "2026-07-24T18:41:52.556Z",
  "_jobs": [
    {
      "job": 89561972568,
      "time": 243,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8606136809"
    },
    {
      "job": 89561972557,
      "time": 222,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8606128198"
    },
    {
      "job": 89561972581,
      "time": 171,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8606093201"
    },
    {
      "job": 89561972540,
      "time": 182,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8606097967"
    },
    {
      "job": 89561070337,
      "time": 240,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8606031108"
    },
    {
      "job": 89561972555,
      "time": 170,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8606105441"
    },
    {
      "job": 89561972583,
      "time": 122,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8606085224"
    },
    {
      "job": 89561972541,
      "time": 292,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8606157461"
    },
    {
      "job": 89561972595,
      "time": 248,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8606139470"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/dboslab/actions/runs/30117299889",
  "_status": "success",
  "_upstream": "https://github.com/dboslab/expowo",
  "_commit": {
    "id": "e2b8e10cf2f7d3ea17af0a90d52609f9a0745986",
    "author": "Débora Zuanny <deborazuanny@gmail.com>",
    "committer": "Débora Zuanny <deborazuanny@gmail.com>",
    "message": "vignettes fixed\n",
    "time": 1784912985
  },
  "_maintainer": {
    "name": "Debora Zuanny",
    "email": "deborazuanny@gmail.com",
    "login": "deborazuanny",
    "description": "",
    "uuid": 90341710,
    "orcid": "0000-0001-6623-3788"
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "RColorBrewer",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "magrittr",
      "role": "Imports"
    },
    {
      "package": "data.table",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "rnaturalearth",
      "role": "Imports"
    },
    {
      "package": "sp",
      "role": "Imports"
    },
    {
      "package": "sf",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "R.utils",
      "role": "Imports"
    },
    {
      "package": "flora",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "role": "Imports"
    },
    {
      "package": "cowplot",
      "role": "Imports"
    },
    {
      "package": "plyr",
      "role": "Imports"
    },
    {
      "package": "PupillometryR",
      "role": "Imports"
    },
    {
      "package": "scales",
      "role": "Imports"
    },
    {
      "package": "viridisLite",
      "role": "Imports"
    },
    {
      "package": "covr",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "dboslab",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-09",
      "n": 3
    },
    {
      "week": "2026-29",
      "n": 3
    },
    {
      "week": "2026-30",
      "n": 3
    }
  ],
  "_tags": [],
  "_topics": [
    "data-mining",
    "extractor"
  ],
  "_stars": 9,
  "_contributors": [
    {
      "user": "deborazuanny",
      "count": 214,
      "uuid": 90341710
    },
    {
      "user": "domingoscardoso",
      "count": 46,
      "uuid": 30157501
    },
    {
      "user": "brunovilela",
      "count": 5,
      "uuid": 5942514
    }
  ],
  "_userbio": {
    "uuid": 105887757,
    "type": "organization",
    "name": "DBOSlab",
    "followers": 7,
    "description": "Laboratory of Diversity, Biogeography and Systematics"
  },
  "_downloads": {
    "count": 278,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/expowo"
  },
  "_devurl": "https://github.com/dboslab/expowo",
  "_pkgdown": "https://dboslab.github.io/expowo/",
  "_searchresults": 104,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/expowo.html",
    "extra/readme.html",
    "extra/readme.md",
    "LICENSE",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/dboslab/expowo",
  "_realowner": "dboslab",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.0",
      "date": "2023-02-22"
    },
    {
      "version": "2.0",
      "date": "2024-03-01"
    },
    {
      "version": "3.0",
      "date": "2026-02-24"
    },
    {
      "version": "3.1",
      "date": "2026-07-24"
    }
  ],
  "_exports": [
    "accGraph",
    "get_year_pubs",
    "megaGen",
    "powoFam",
    "powoGenera",
    "powoMap",
    "powoSpDist",
    "powoSpecies",
    "saveCSV",
    "topGen"
  ],
  "_datasets": [
    {
      "name": "angioData",
      "title": "List of Angiosperm species",
      "object": "angioData",
      "class": [
        "data.frame"
      ],
      "fields": [
        "family",
        "genus",
        "species",
        "taxon_name",
        "authors",
        "scientific_name",
        "publication",
        "native_to_country",
        "native_to_botanical_countries",
        "introduced_to_country",
        "introduced_to_botanical_countries",
        "kew_id",
        "powo_uri"
      ],
      "rows": 3122,
      "table": true,
      "tojson": true
    },
    {
      "name": "angioGenera",
      "title": "List of Angiosperm genera",
      "object": "angioGenera",
      "class": [
        "data.frame"
      ],
      "fields": [
        "family",
        "genus",
        "authors",
        "scientific_name",
        "publication",
        "species_number",
        "native_to_country",
        "native_to_botanical_countries",
        "introduced_to_country",
        "introduced_to_botanical_countries",
        "kew_id",
        "powo_uri"
      ],
      "rows": 63,
      "table": true,
      "tojson": true
    },
    {
      "name": "botregions",
      "title": "Countries and associated classification of botanical divisions",
      "object": "botregions",
      "class": [
        "data.frame"
      ],
      "fields": [
        "country",
        "botanical_division"
      ],
      "rows": 392,
      "table": true,
      "tojson": true
    },
    {
      "name": "POWOcodes",
      "title": "Complete list of vascular plant families and associated URI addresses",
      "object": "POWOcodes",
      "class": [
        "data.frame"
      ],
      "fields": [
        "family",
        "uri",
        "group"
      ],
      "rows": 453,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "accGraph",
      "title": "Create graphics of species discoveries accumulation and nomenclatural changes",
      "topics": [
        "accGraph"
      ]
    },
    {
      "page": "angioData",
      "title": "List of Angiosperm species",
      "topics": [
        "angioData"
      ]
    },
    {
      "page": "angioGenera",
      "title": "List of Angiosperm genera",
      "topics": [
        "angioGenera"
      ]
    },
    {
      "page": "botregions",
      "title": "Countries and associated classification of botanical divisions",
      "topics": [
        "botregions"
      ]
    },
    {
      "page": "get_year_pubs",
      "title": "Secondary function to transform data generated with powoSpecies",
      "topics": [
        "get_year_pubs"
      ]
    },
    {
      "page": "megaGen",
      "title": "Extract megadiverse genera of any plant family",
      "topics": [
        "megaGen"
      ]
    },
    {
      "page": "POWOcodes",
      "title": "Complete list of vascular plant families and associated URI addresses",
      "topics": [
        "POWOcodes"
      ]
    },
    {
      "page": "powoFam",
      "title": "Extract species number of any plant family",
      "topics": [
        "powoFam"
      ]
    },
    {
      "page": "powoGenera",
      "title": "Extract list of genera for any plant family",
      "topics": [
        "powoGenera"
      ]
    },
    {
      "page": "powoMap",
      "title": "Create global maps of species richness",
      "topics": [
        "powoMap"
      ]
    },
    {
      "page": "powoSpDist",
      "title": "Extract distribution of any plant species",
      "topics": [
        "powoSpDist"
      ]
    },
    {
      "page": "powoSpecies",
      "title": "Extract list of species for any plant genus and family",
      "topics": [
        "powoSpecies"
      ]
    },
    {
      "page": "saveCSV",
      "title": "Fastly save CSV file within a current date folder",
      "topics": [
        "saveCSV"
      ]
    },
    {
      "page": "topGen",
      "title": "Extract the top most species-rich genera of any plant family",
      "topics": [
        "topGen"
      ]
    }
  ],
  "_readme": "https://github.com/dboslab/expowo/raw/HEAD/README.md",
  "_rundeps": [
    "ash",
    "askpass",
    "bitops",
    "class",
    "classInt",
    "cli",
    "cluster",
    "colorspace",
    "cowplot",
    "cpp11",
    "curl",
    "data.table",
    "DBI",
    "deSolve",
    "dplyr",
    "e1071",
    "farver",
    "fda",
    "fds",
    "flora",
    "FNN",
    "generics",
    "ggplot2",
    "glue",
    "gtable",
    "hdrcde",
    "httr",
    "isoband",
    "jsonlite",
    "kernlab",
    "KernSmooth",
    "ks",
    "labeling",
    "lattice",
    "lifecycle",
    "locfit",
    "magrittr",
    "MASS",
    "Matrix",
    "mclust",
    "mgcv",
    "mime",
    "multicool",
    "mvtnorm",
    "nlme",
    "openssl",
    "pcaPP",
    "pillar",
    "pkgconfig",
    "plyr",
    "pracma",
    "proxy",
    "PupillometryR",
    "purrr",
    "R.methodsS3",
    "R.oo",
    "R.utils",
    "R6",
    "rainbow",
    "RColorBrewer",
    "Rcpp",
    "RCurl",
    "rlang",
    "rnaturalearth",
    "s2",
    "S7",
    "scales",
    "sf",
    "signal",
    "sp",
    "stringdist",
    "stringi",
    "stringr",
    "sys",
    "terra",
    "tibble",
    "tidyr",
    "tidyselect",
    "units",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr",
    "wk",
    "zoo"
  ],
  "_vignettes": [
    {
      "source": "data_package.Rmd",
      "filename": "data_package.html",
      "title": "Associated data",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Setup",
        "POWOcodes - A complete list of vascular plant families and associated URI addresses",
        "angioData - A dataframe of Angiosperm species",
        "angioGenera - A data frame of Angiosperm genera",
        "botregions - Countries and associated classification of botanical divisions",
        "Reference"
      ],
      "created": "2023-03-28 18:44:12",
      "modified": "2026-07-24 14:58:04",
      "commits": 8
    },
    {
      "source": "mapping_distribution.Rmd",
      "filename": "mapping_distribution.html",
      "title": "Mapping global distribution for any taxonomic level",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Setup",
        "1. Mining species distribution from POWO to use as input data in powoMap",
        "2. Creating global-scale map for one genus to show species richness at political country level",
        "3. Creating global-scale map for one genus to show species richness at botanical country level",
        "4. Creating global-scale map of species richness for an entire family",
        "5. Using an external spreadsheet as input data in powoMap",
        "6. Reference"
      ],
      "created": "2023-02-09 14:18:46",
      "modified": "2026-07-24 14:58:04",
      "commits": 15
    },
    {
      "source": "mining_species_distribution.Rmd",
      "filename": "mining_species_distribution.html",
      "title": "Mining distribution for any plant species",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Setup",
        "Mining the distribution for any plant species",
        "Mining distribution for all vascular plant species",
        "Reference"
      ],
      "created": "2023-02-09 14:18:46",
      "modified": "2026-07-24 14:58:04",
      "commits": 10
    },
    {
      "source": "mining_accepted_genera.Rmd",
      "filename": "mining_accepted_genera.html",
      "title": "Mining genus list for any vascular plant family",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Setup",
        "Mining all accepted genera for some plant families",
        "Mining all accepted genera for all vascular plant families",
        "Narrowing down the powoGenera search based on a specified country vector",
        "Narrowing down the powoGenera search based on a specified genus vector",
        "Reference"
      ],
      "created": "2022-05-17 14:03:51",
      "modified": "2026-07-24 15:37:07",
      "commits": 15
    },
    {
      "source": "mining_species.Rmd",
      "filename": "mining_species.html",
      "title": "Mining species list for any plant family",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Setup",
        "Mining all accepted species for any plant family",
        "Narrowing down the powoSpecies search based on a specified country vector",
        "Narrowing down the powoSpecies search based on a specified genus and country vector",
        "Mining all accepted species for all plant families",
        "Reference"
      ],
      "created": "2024-02-26 12:20:36",
      "modified": "2026-07-24 14:58:04",
      "commits": 4
    },
    {
      "source": "mining_family_species_number.Rmd",
      "filename": "mining_family_species_number.html",
      "title": "Mining species number of any plant family",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Setup",
        "Mining the total species number for any plant family",
        "Mining species number accross all plant families",
        "Reference"
      ],
      "created": "2023-02-09 14:18:46",
      "modified": "2026-07-24 14:58:04",
      "commits": 9
    },
    {
      "source": "mining_toprichest_genera.Rmd",
      "filename": "mining_toprichest_genera.html",
      "title": "Mining the top richest genera of vascular plants",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Setup",
        "Mining the top richest genera for any vascular plant family",
        "Mining the top richest genera accross all vascular plant families",
        "Reference"
      ],
      "created": "2023-02-09 14:18:46",
      "modified": "2026-07-24 14:58:04",
      "commits": 9
    },
    {
      "source": "plotting_nomenclatural_changes.Rmd",
      "filename": "plotting_nomenclatural_changes.html",
      "title": "Plotting nomenclatural changes",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Setup",
        "1. Plotting nomenclatural changes for the entire dataset"
      ],
      "created": "2024-03-01 00:29:42",
      "modified": "2026-07-14 14:28:53",
      "commits": 2
    },
    {
      "source": "plotting_discoveries.Rmd",
      "filename": "plotting_discoveries.html",
      "title": "Plotting species discovery",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Setup",
        "1. Plotting the species discoveries for one genus",
        "2. Plotting the species discoveries for the entire dataset"
      ],
      "created": "2023-08-23 14:07:11",
      "modified": "2026-07-14 14:28:53",
      "commits": 10
    }
  ],
  "_score": 7.402639612897092,
  "_indexed": true,
  "_nocasepkg": "expowo",
  "_universes": [
    "dboslab",
    "deborazuanny"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "3.1",
      "date": "2026-07-24T18:39:47.000Z",
      "distro": "resolute",
      "commit": "e2b8e10cf2f7d3ea17af0a90d52609f9a0745986",
      "fileid": "https://r2.ropensci.org/74baf472dd85d45ec9c070d93a51b182105ecc9612b366cf73b65eb42397a539",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/dboslab/actions/runs/30117299889"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "3.1",
      "date": "2026-07-24T18:39:29.000Z",
      "distro": "resolute",
      "commit": "e2b8e10cf2f7d3ea17af0a90d52609f9a0745986",
      "fileid": "https://r2.ropensci.org/5d93d104445add3b1d31365e042c6a31469a0510d172097e2479747d17735486",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/dboslab/actions/runs/30117299889"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "3.1",
      "date": "2026-07-24T18:38:23.000Z",
      "commit": "e2b8e10cf2f7d3ea17af0a90d52609f9a0745986",
      "fileid": "https://r2.ropensci.org/3048c1281cac0ce80983ab81873afc6929f99275585791f079898d32c4adb09b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/dboslab/actions/runs/30117299889"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "3.1",
      "date": "2026-07-24T18:38:28.000Z",
      "commit": "e2b8e10cf2f7d3ea17af0a90d52609f9a0745986",
      "fileid": "https://r2.ropensci.org/f3e0937bb646bb64cb9bee81690f022fabc9c40c0594b28d693f6db8044b1d5c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/dboslab/actions/runs/30117299889"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "3.1",
      "date": "2026-07-24T18:39:15.000Z",
      "commit": "e2b8e10cf2f7d3ea17af0a90d52609f9a0745986",
      "fileid": "https://r2.ropensci.org/33d56d82e0108a564d800f4bbaeb04fc495cdc4c547e9d737254b6f98e12c7ee",
      "status": "success",
      "buildurl": "https://github.com/r-universe/dboslab/actions/runs/30117299889"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "3.1",
      "date": "2026-07-24T18:37:40.000Z",
      "commit": "e2b8e10cf2f7d3ea17af0a90d52609f9a0745986",
      "fileid": "https://r2.ropensci.org/e397cd9db50e7125a4795e9c7da883ebaa2b9b667e455d5f41cf618013e9cb6b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/dboslab/actions/runs/30117299889"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "3.1",
      "date": "2026-07-24T18:40:30.000Z",
      "commit": "e2b8e10cf2f7d3ea17af0a90d52609f9a0745986",
      "fileid": "https://r2.ropensci.org/5534b9cc998c548b9ef097f4c74a877d7789f409adc3c48bad2968f59b2ca6a9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/dboslab/actions/runs/30117299889"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "3.1",
      "date": "2026-07-24T18:39:48.000Z",
      "commit": "e2b8e10cf2f7d3ea17af0a90d52609f9a0745986",
      "fileid": "https://r2.ropensci.org/cec9a81639ad5444084c52a0270e4b8d1896ef96241481befd9f506e4b72f713",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/dboslab/actions/runs/30117299889"
    }
  ]
}